Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGF-FAKEELADFSAFGSRIIGHPNNKVAGIEMNTGSLGHGLSVSVGMALAAKMDG-------KSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEADGNNPDKLQAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
3L84 Chain:A ((4-273)) | -QILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY-HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92868 for 2343 contacts (-39.6/contact) +
2D Compatibility (PS) -28288 + (NN) -13132 + (LL) 972
1D Compatibility (HY) -7600 + (ID) 4450
Total energy: -145366.0 ( -62.04 by residue)
QMean score : 0.468
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