Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2OS0 Chain:A ((1-187))
MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGDVGLAAPQLDISKRIIAVHVP-----SLSTVMYNPKILSHSVQDVCLGEGEGCLSVDRDVPGYVVRHNKITVSYFDMAGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFALKEGVLVIE
General information:
TITO was launched using:
RESULT:
Template:
2OS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111401 for 1391 contacts (-80.1/contact) +
2D Compatibility (PS) -19300 + (NN) -10343 + (LL) 116
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -167978.0 ( -120.76 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_2OS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS0-query.scw
PDB file :
Tito_Scwrl_2OS0.pdb
: