Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISQIKAEVVTPETGIHVGEKAAPVKVMSFVNLRCPFCREWNEKSKDVLTEYIQAGKIELIIKPFDKEKESLQRGNVTHRYLDYSTPEKTRETINKIYSKQDEWGSLSLDEVATYMESELGLTEQDNKAASEKIVAEANAANVVFVPTVIVGEHIFDEHISPEELRSLLDDELAK
1Z6M Chain:A ((4-175))
MDISVIDATKVNTETGLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQDEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIIIGEYIFDESVTEEELRGYIEK----
General information:
TITO was launched using:
RESULT:
Template:
1Z6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79715 for 1360 contacts (-58.6/contact) +
2D Compatibility (PS) -18161 + (NN) -3083 + (LL) 488
1D Compatibility (HY) -18800 + (ID) 4700
Total energy: -123971.0 ( -91.16 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6M-query.scw
PDB file :
Tito_Scwrl_1Z6M.pdb
: