Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKNNSKKDKM-YKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTM-DEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQDNVVAPFPIK |
| 4EAE Chain:A ((4-190)) | ---------------------------------------------------------------------------------------------------EAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKNNSKKD-KMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTF-TMDEATYNDLAKDSQIGVPDPSRFDS---SGSSQDNVVAPFPIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72125 for 1402 contacts (-51.4/contact) +
2D Compatibility (PS) -19721 + (NN) -6868 + (LL) 3756
1D Compatibility (HY) -20800 + (ID) 8950
Total energy: -124708.0 ( -88.95 by residue)
QMean score : 0.516
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