Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWFEFATEILKD-K-DVTVNPCTSDEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDALVRFKK |
| 1VL0 Chain:A ((13-287)) | MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQ-YDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDG-NNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE-KNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122590 for 2409 contacts (-50.9/contact) +
2D Compatibility (PS) -29854 + (NN) -15536 + (LL) -12
1D Compatibility (HY) -19200 + (ID) 5800
Total energy: -192992.0 ( -80.11 by residue)
QMean score : 0.568
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