Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQVYRLVSERQFEEANIEEALTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATGE----FEIGTKVVMIPNTPTEDDPVIA-----------ENYRRSSLFRSSGYDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQKANANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQYKLDFF--SFVDEAHLVDEIPEG-----------LVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENPIEFNSRMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
4ILK Chain:A ((47-349)) | ---------------------------VRVKVKLAGICGSDSHIY---RGHNP----YPRVIGHEFFGVI--DAVGEGVESARVGERVAV--------DPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAAN-VTGHGQPTE-NDTVL-VYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEKGIKPTLIIDAACH-------PSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIF-SSRLNANKFPVVIDWLSKGLIKPE---KLITHTFDFQHVADAISLFELDQKH----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ILK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158072 for 2281 contacts (-69.3/contact) +
2D Compatibility (PS) -28684 + (NN) -5186 + (LL) 3912
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -205130.0 ( -89.93 by residue)
QMean score : 0.480
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