Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRLAEGIVIEKEKTFGTLKFSALRREVKIVDDEGNVTEQVKERTFDLKCKEQGRMIQVSIPASAGVKNFDYNAEVEIINPIADTVATATFQGADVDWYIKAEDIVLKRPAQNQQADQKQNHDKK
2K5D Chain:A ((1-110))
MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTLE---------------
General information:
TITO was launched using:
RESULT:
Template:
2K5D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26609 for 651 contacts (-40.9/contact) +
2D Compatibility (PS) -11064 + (NN) 2237 + (LL) 812
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -51774.0 ( -79.53 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_2K5D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5D-query.scw
PDB file :
Tito_Scwrl_2K5D.pdb
: