Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVVKDYAYYKSLTTLG---DSNLAIM-EYDVKILDETKVLS-YYK--LKNLS----ENNYTMRSNIWIFENGSWKLTFHQGTRII
3HZP Chain:A ((3-122))
--SSKEEILSILEAFASTERM--GSFFLDNATADFLFIRPSGNPLDAKGFENMWSSGDLVLESAEITKVHKFELLG-SNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKKIDEKWKVAWMQRSSG-
General information:
TITO was launched using:
RESULT:
Template:
3HZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14629 for 707 contacts (-20.7/contact) +
2D Compatibility (PS) -11428 + (NN) 1549 + (LL) 636
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -23572.0 ( -33.34 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_3HZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZP-query.scw
PDB file :
Tito_Scwrl_3HZP.pdb
: