Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAVQLTEFVGTA-IGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
4FAY Chain:B ((31-257))
-------VPEFVGASEIGDTIGMVIPRVDQQLLDKLHVTKQYKTLGILSDRTGAGPQIMAMDEGIKATNMECIDVEWPRDTKGGGGHGCLIIIGGDDPADARQAIRVALDNLHRTFGDVYNAKAGHLELQFTARAAGAAHLGLGAVEGKAFGLICGCPSGIGVVMGDKALKTAGVEPLNFTSPSHGTSFSNEGCLTITGDSGAVRQAVMAGREVGLKLLSQFGEEPVNDFPSYI
General information:
TITO was launched using:
RESULT:
Template:
4FAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109089 for 2017 contacts (-54.1/contact) +
2D Compatibility (PS) -24379 + (NN) -15981 + (LL) 804
1D Compatibility (HY) -22800 + (ID) 6800
Total energy: -178245.0 ( -88.37 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_4FAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FAY-query.scw
PDB file :
Tito_Scwrl_4FAY.pdb
: