Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQF---IPEMHIDTDEANAADIAGTNFAKIIKS |
3TIW Chain:A ((38-108)) | --------------------------------------------------------------------------------------------------------------------------------------------VVSLSQPKMDELQLFRGDTVLLKGK-KRR-E----AVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47019 for 396 contacts (-118.7/contact) +
2D Compatibility (PS) -6711 + (NN) 182 + (LL) 10640
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -44958.0 ( -113.53 by residue)
QMean score : 0.635
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