Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENN-VP--LFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTV------------------------------------------------------------GNNKKVVANVIESAGMEALYTIDEPTAAAAVLD-------LQNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDSSEHFSVMRPVVEKMAEITRVHLEKS----PSEPLYIVGGASAYSQFKDTFESYLKMPVFQ--------------------PNYPQYVTPLGIAMSSGSENL |
| 2YCH Chain:A ((11-374)) | ----------------------------PRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEART----RKRYVVTALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLAAEEVKRTY---GRIYDAIRPVLVELTQELRRSLEFFRIQLSPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96940 for 1991 contacts (-48.7/contact) +
2D Compatibility (PS) -25518 + (NN) -7571 + (LL) 3264
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -137815.0 ( -69.22 by residue)
QMean score : 0.446
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