Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSFQIKTKVAFGTNSLQVLK-E---IKNKNVWIICDRFLADGEGLQGLIGQLD-ASNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYYFAKRLEK-----------INISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQLVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQMPRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII |
| 3BFJ Chain:A ((7-387)) | --DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIA---NPEKFADIAELMGENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLGVKE----TDFPYMAEMALKDGNAFSNPRKGNEQEIAAIFRQAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236941 for 3450 contacts (-68.7/contact) +
2D Compatibility (PS) -38858 + (NN) -14633 + (LL) 704
1D Compatibility (HY) -22400 + (ID) 6350
Total energy: -318478.0 ( -92.31 by residue)
QMean score : 0.531
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