Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
4AXJ Chain:B ((3-91))
-ASANALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPRPHFEVDAILP----
General information:
TITO was launched using:
RESULT:
Template:
4AXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29691 for 716 contacts (-41.5/contact) +
2D Compatibility (PS) -9821 + (NN) -2474 + (LL) 492
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -56844.0 ( -79.39 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4AXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXJ-query.scw
PDB file :
Tito_Scwrl_4AXJ.pdb
: