Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVHFVGAGPGDKELITLKGYQLLKEADVVIYAGSLVNPELLEYCKASCEIHNSASMNLIEIIDCMEAGVTAGKEVVRLQTGDFSIYGSIREQVEEMKKRSIPFTCTPGVSSFLGAASSFGVEYTVPEVSQSVIITRMAGRTPVPSRESLRSYAAHQTSMVIFLSVQGIRKVVSELIKGGYKPETPAAVIYKATWAEEKKVTGTLEDIAEKVTEAGITKTALIMVGDFLGEEFYYSKLYDKDFKHEYR
1CBF Chain:A ((20-251))
HMKLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDLAKHKCTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVRTTVKDLDDAMRTNGIRKQAMILAGWALDP-----------------
General information:
TITO was launched using:
RESULT:
Template:
1CBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158031 for 1891 contacts (-83.6/contact) +
2D Compatibility (PS) -25136 + (NN) -9732 + (LL) 1172
1D Compatibility (HY) -21600 + (ID) 4800
Total energy: -218127.0 ( -115.35 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1CBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBF-query.scw
PDB file :
Tito_Scwrl_1CBF.pdb
: