Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQA-ELEQIQQQLFDAGGDLAT--EEGKRAYKLTSE-PVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
3CI3 Chain:A ((7-194))
VKIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYRNSKDVFR----
General information:
TITO was launched using:
RESULT:
Template:
3CI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57412 for 1380 contacts (-41.6/contact) +
2D Compatibility (PS) -19743 + (NN) -8665 + (LL) 112
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -107408.0 ( -77.83 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3CI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CI3-query.scw
PDB file :
Tito_Scwrl_3CI3.pdb
: