Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIIIATANKGKAKEFEKIFAKFNIEVATLADFPEIGEIEETGTTFAENAALKAETVASVLNQTVIADDSGLIVDALDGAPGVYSARYAGVAHDDAKNNEKLLKNLEGVEPDKRTARFHCTLAVATPSE--KTSFYTGEVEGVIAEQLCGTNGFGYDPLFFLPEFGLTMAEIPAEKKNEISHRANAIKQLEKDLVEVVEKVTKK
3TQU Chain:A ((4-200))
MLEIVLASQNSSKLAEMQELLRDLEIKFIPQTEFS-VPDIEETGSTFVENAIIKARHAAKQTGLPALADDSGLTIAALNSAPGVFSSRYAGKNATDAERIQKVLEALEAADDSDRSASFHCVIALMENENDPAPLICHGVWEGEIAREPRGKNGFGYDPIFYVPSHQRTAAELDPQEKNAISHRGQALEQLSTVLTEA-------
General information:
TITO was launched using:
RESULT:
Template:
3TQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87155 for 1568 contacts (-55.6/contact) +
2D Compatibility (PS) -21209 + (NN) -12391 + (LL) 836
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -135069.0 ( -86.14 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3TQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQU-query.scw
PDB file :
Tito_Scwrl_3TQU.pdb
: