Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGLDIGTAKITPEEMDEIKHYLIDVTDPSEPFTAAKFQTETRKWIETIHQAGKLPIIVGGTGLYIQSVFYDYDFGNVSEDKAYRAELEQLNKT---LLWQMLEQQDPESAAQIHENNKRRVIRALEVMHLTGKPFSEYQVHNVLNDTYKPLFLGLDLDRALLYERINQRVNLMFEEGLVTEAKKLYDQHLVD--VPAVCG------IGYKELFPYFEGKSS--LEEAKELIQKNSRHFAKRQLTWFRNRMEIDWIQAGVSTTEAEALNKAETFLSVK
3EPH Chain:A ((4-316))-----VIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPWLT----VKLEDCIERMKTRTRQYAKRQVKWIK-KMLIPDIKGDIYLLDATDLSQWDTNAS--


General information:
TITO was launched using:
RESULT:

Template: 3EPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115081 for 2195 contacts (-52.4/contact) +
2D Compatibility (PS) -32139 + (NN) -17449 + (LL) 288
1D Compatibility (HY) -18400 + (ID) 5650
Total energy: -188431.0 ( -85.85 by residue)
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3EPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EPH-query.scw
PDB file : Tito_Scwrl_3EPH.pdb: