Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
| 4NLM Chain:A ((35-363)) | ----------------------------------KEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFRT-GFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIG--AKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159870 for 2500 contacts (-63.9/contact) +
2D Compatibility (PS) -35064 + (NN) -9687 + (LL) 2672
1D Compatibility (HY) -47600 + (ID) 16300
Total energy: -265849.0 ( -106.34 by residue)
QMean score : 0.483
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