Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQCYNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQID----------------GNKLSFSNG--KDLITYSKYNDLVRRQV----NG-----KGHEPLLTNVKDYQLIKKE------------------------KQLHLTVQDSNTQIYTSVFALPEVVSNP |
| 3NJE Chain:A ((38-196)) | -----------------------------------------------------EQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8359 for 609 contacts (-13.7/contact) +
2D Compatibility (PS) -10667 + (NN) -617 + (LL) 4460
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -19783.0 ( -32.48 by residue)
QMean score : 0.536
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