Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHP-IPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGE--------------------KCHPLCTHLRR-KRTAIYEVLTKQDIK-AYFQSNQ------QQIEPKYPIK-RTFEKGVSYGFFSAY |
| 1P9R Chain:A ((33-404)) | -IIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL-----AVDVRVSTMPSS-HGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNS-SERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212015 for 2568 contacts (-82.6/contact) +
2D Compatibility (PS) -35384 + (NN) -4599 + (LL) 244
1D Compatibility (HY) -20400 + (ID) 5650
Total energy: -277804.0 ( -108.18 by residue)
QMean score : 0.478
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