Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLE--YFYLEKNSPVWVMRMKKIPFLRGIVALI--ESSAIGS-------KHLAFATDRYDEDPNNPVE---EEKIEKKESKVAM------------------WLGVAVIG---ILSFVFAKFVMTL------------IPVFLAELFRPIVPGD--TAQVFLESLFKL---------------------ILLLTYIFAVSQT-----PIIKRVFQYHGSEH----KVINCYEENLP----------------LTVENVQKQSRLHYRCGSSFILFT---------------VIVGMFIYLLVPTDPLWLRVV-DRILLIPVVLGVAFEVLQLTNKCRNI--PVLKYLGVP-GLWL---QLLTTK-----EPSDDQVEVAIASFNEL------LRVEKEGAPIDVVEPDNLELLE---------------- |
| 4MR0 Chain:A ((114-571)) | -TALSVKDYG--AVGDG-IHDDRQAIQDAIDAAAQGLGGGNVYFPEG----TYLVKEIVFLKSHTHLELNEKATILNGINIKNHPSIVFMTGLFTDD-GAQVEWGPTEDISYSGGTIDMNGALNEEGTKAKNLPLINSSGAFAIGNSNNVTIKNVTFKDSYQGHAIQIAGSKNVLVDNSRFLGQALPKTMKDGQIISKESIQIEPLTRKGFPYALNDDGKKSENVTIQNSYFGKSDKSGELVTAIGTHYQTLSTQNPSNIKILNNHFDNMMYAGVRFTGFTDVLIKGNRFDKKVKGESVHYRESGAALVNAYSYKNTKDLLDLNKQVVIAENIFNIADPKTKAIRVAKDSAEYLGKVSDITVTKNVINNNSKETEQPNIELLRVSDNLVVSENSIFGGKEGIVIEDSKGKITVLNNQFYNLSGKYISFIKSNANGKEPVISDGNFNIVTENGLYKIVTNNLSDKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218974 for 2266 contacts (-96.6/contact) +
2D Compatibility (PS) -32478 + (NN) 10910 + (LL) 356
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -254536.0 ( -112.33 by residue)
QMean score : 0.175
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