Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRREAREKALQALFQIELNEMSLDQAIKNIMEDEQ------DDYMEKLVEGVMANKAEIDAIIEPNLDNWRMDRLSKVDLSLLRLSVYEIKYLDDV-PNRVSLNESIEIAKIYSDEKSSKFINGVLANIAPEDK
4EYA Chain:D ((4-130))
--RKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFID-IVDLVKKYADEKAGKFVNGVLSAI-----
General information:
TITO was launched using:
RESULT:
Template:
4EYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52906 for 916 contacts (-57.8/contact) +
2D Compatibility (PS) -12920 + (NN) -6988 + (LL) 472
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -85392.0 ( -93.22 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_4EYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYA-query.scw
PDB file :
Tito_Scwrl_4EYA.pdb
: