Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEIIDGKKLAKEIQEKVTREVAELVKEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFIGK-DSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKMN |
3P2O Chain:A ((4-284)) | -MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176037 for 2411 contacts (-73.0/contact) +
2D Compatibility (PS) -30254 + (NN) -11659 + (LL) 400
1D Compatibility (HY) -34000 + (ID) 6950
Total energy: -258500.0 ( -107.22 by residue)
QMean score : 0.652
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