Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLQDLTLFLEQYKKVIDE---SLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSALSGHD--FDDEILLKLADLIALREN
1RTR Chain:A ((8-291))------------KLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEA-------------KSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSR--


General information:
TITO was launched using:
RESULT:

Template: 1RTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109596 for 2144 contacts (-51.1/contact) +
2D Compatibility (PS) -28999 + (NN) -16390 + (LL) 1884
1D Compatibility (HY) -26400 + (ID) 7100
Total energy: -186601.0 ( -87.03 by residue)
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_1RTR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RTR-query.scw
PDB file : Tito_Scwrl_1RTR.pdb: