Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVSPEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK |
1P0K Chain:B ((22-349)) | -------------------------E---TGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVM----RSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGG---------------RQ-ISFFNSWGISTAASLAEIR-SEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAPLVIKGETHHWLTERGVNTSSYSVR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -194778 for 2709 contacts (-71.9/contact) +
2D Compatibility (PS) -33326 + (NN) -7974 + (LL) 2740
1D Compatibility (HY) -22800 + (ID) 6350
Total energy: -262488.0 ( -96.89 by residue)
QMean score : 0.590
|
|
|