Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAALQILDEEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFSRAIEIKEACYGATAGINLAKDYVAKHPDSKVLVIGSDIARYGLATGGEATQGAGAVAMVIAADPRCITLEDDNVFYTEDIMDFWRPVYSEYACVEGKYSTEQYIHFFQTIWEKYSAKFGKNLEDFAAICFHLPYTKMGKKALDTIIETAPSDVQEKLLENYRLSTLYSRNVGNIYTGSLYLSFISLLDNQPDLQAEDKIGFFSYGSGAVGEFFHGVLQPDYKKYIRKDEHAELLANRTKLAIPDYETKFKQQLPKDGSIFEVDPASDPAAIVLTGIQEHKRQYIKK |
1X9E Chain:A ((1-383)) | MTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTKEDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEACYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASEPRILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVAEFFTGELVAGYQNHLQKETHLALLDNRTELSIAEYEAMFAETLDTDID----QTLEDELKYSISAINNTVRSYRN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244518 for 3459 contacts (-70.7/contact) +
2D Compatibility (PS) -40343 + (NN) -10935 + (LL) 696
1D Compatibility (HY) -40400 + (ID) 10450
Total energy: -345950.0 ( -100.01 by residue)
QMean score : 0.513
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