Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKFIALFSVLLLTSSLFLSSCSLPGLGGSSKDTIRIGAMATTESQIVSNILKELIEHDT--GLKVEIVNN-LGSTIVQHQAMLNGDVDIT-ATRYTGTDLVGPLGEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKKYNLNTVSDMRKVENELTAGVDNSWMEREGDGYKAFSKAYDIEFKKIFPMQIGLIYTALKNNQMDVALGYSTDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEMQKLNYEADGKLKEPSIVAQEFLQKNNYFEGKN |
| 3O66 Chain:A ((7-281)) | -------------------------------TKNDVKITALSTSESQIISHMLRLLIEHDTHGKIKPTLV-NNLGSSTIQHNALINGDANISGVRY-NGTDLTGALKEAPIKDPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTKETAKKYHLETVSDLAKHSKDLRLGMDSSWMN--GDGYEGFKKEYGFDFGTVRPMQIGLVYDALNTEKLDVALGYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSEMQRLNYEADGKGKEPAVVAEEFLKKHHYF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107704 for 2294 contacts (-47.0/contact) +
2D Compatibility (PS) -28671 + (NN) -7941 + (LL) 2132
1D Compatibility (HY) -28000 + (ID) 8250
Total energy: -178434.0 ( -77.78 by residue)
QMean score : 0.581
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