Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVLKFEHVTKTYKGGKKAVN-DLTLNIDKGEFVCFIGPSGCGKTTTMKMINRLIEPTEGKIFINDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSEEKKQERAKELIKLVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMDEPFGALDPITRDSLQEEFKNLQKELGKTIIFVTHDMDEAIKLADRIVIMKDGEIVQFDTPDEILRNPANSFVEDFIGKDRLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFIDVEQIDLNRRTATSVMDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATENQEEQADSKTTEPEMKQEG
3PUZ Chain:B ((4-278))-VQLQNVTKAW--GEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAE--RGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQL-AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPK--------------MNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVG-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167301 for 2038 contacts (-82.1/contact) +
2D Compatibility (PS) -29675 + (NN) -7138 + (LL) 9872
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -224392.0 ( -110.10 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_3PUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUZ-query.scw
PDB file : Tito_Scwrl_3PUZ.pdb: