Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTVNNVGLRYGDKK-LFEDVSIKFLPGNCYGLIGANGAGKSTFLKVLSG-------ELDSQSGNVHIGSGERLAVLRQDHFQYDD-ELVLNTVIMGHERLYKIMDEKNAIYMKEDFSDEDGIRAAELEGEFAEL----DGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGEKVKVLLAQALFGKPDILLLDEPTNHLDIRAIHWLEEFLINFDNTVIVVSHDRHFLNKVCTHIADLDFSKIKLYVGNYDFWYES--SQLAQTMMGDRNKKKEEKMKELQDFIARFSANASKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKILDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNSEFFEENDMSLVEWLRQFSPED-----DSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCMLSKMMLSGSNVLLLDEPTNHLDLESITALNNGLEAFKGAIIFASHDHQLLQTIATRIINL---SKDQFYNKEIS-YDEYLKEVMNVAE |
| 3J5S Chain:D ((13-546)) | --TMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQP-DIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRL----DEVYALYADPD-ADFDKL-AAE-QGRLEEIIQAHDGHNLNVQLERAADALRLP-DWDAKIA-NLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIE-KELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELF----IPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV----DQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119965 for 3927 contacts (-30.5/contact) +
2D Compatibility (PS) -54210 + (NN) -15951 + (LL) 1844
1D Compatibility (HY) -26000 + (ID) 9000
Total energy: -223282.0 ( -56.86 by residue)
QMean score : 0.336
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