Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYG--TAPD-VVHLVETKADIDALSLLS-DKIFVTNQTTMSKWDVADLMHYIKGKFPKAI--QHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWK-REHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
| 3UTD Chain:B ((9-314)) | MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFI-----EQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELA-QRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFE--VPK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171902 for 2546 contacts (-67.5/contact) +
2D Compatibility (PS) -32384 + (NN) -9329 + (LL) 1680
1D Compatibility (HY) -17200 + (ID) 5700
Total energy: -234835.0 ( -92.24 by residue)
QMean score : 0.590
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