Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKDLTPDDEVTVISRELKQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELENIVKATIEEVGASSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS
1NG6 Chain:A ((1-148))
MSLLERLNQDMKLYMKNREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEELTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDILEVYLPEQLSEEELRTIVNETIAEVGASSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS
General information:
TITO was launched using:
RESULT:
Template:
1NG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24139 for 1003 contacts (-24.1/contact) +
2D Compatibility (PS) -15954 + (NN) -8564 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 4550
Total energy: -68807.0 ( -68.60 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_1NG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NG6-query.scw
PDB file :
Tito_Scwrl_1NG6.pdb
: