Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVKRKKKSEAARKRKF
5AJ3 Chain:U ((8-64))
IARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIY
General information:
TITO was launched using:
RESULT:
Template:
5AJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12669 for 245 contacts (51.7/contact) +
2D Compatibility (PS) -6349 + (NN) -3312 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -1742.0 ( -7.11 by residue)
QMean score : 0.711
(partial model without unconserved sides chains):
PDB file :
Tito_5AJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AJ3-query.scw
PDB file :
Tito_Scwrl_5AJ3.pdb
: