Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLM-DSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNN---NHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN
3DON Chain:A ((2-267))
--KFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQ-DIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT------MSRFNNWSLNINKINLSHAESHLDEFDIIINTTP-------D-SVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKLKG-
General information:
TITO was launched using:
RESULT:
Template:
3DON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114293 for 2125 contacts (-53.8/contact) +
2D Compatibility (PS) -28176 + (NN) -15626 + (LL) 1480
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -186815.0 ( -87.91 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3DON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DON-query.scw
PDB file :
Tito_Scwrl_3DON.pdb
: