Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAIT--NTYGNPSS-IHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGTHIITSQIEHHAVLKTCEYLETQGFEVTYLPVDEHGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRDQQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYV--KNGTRLAYQMHGGEQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIWRSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
| 3LVJ Chain:B ((20-399)) | MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIE-EVYLNGDLEHGAPNILNVSFNYVEGESLIMAL--KDLAVSSGSAC----LEPSYVLRAL-GLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180903 for 3301 contacts (-54.8/contact) +
2D Compatibility (PS) -40691 + (NN) -16625 + (LL) 992
1D Compatibility (HY) -28000 + (ID) 8100
Total energy: -273327.0 ( -82.80 by residue)
QMean score : 0.539
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