Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
4R25 Chain:A ((1-114))
-SHMFKVEIVTRPANFEKLKQELGKIGVTSLTFSNVHGCGLQKAHTELYRGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLKTGSPGDGKIFVYEISNTINIRTGEEGPEAL------
General information:
TITO was launched using:
RESULT:
Template:
4R25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60355 for 698 contacts (-86.5/contact) +
2D Compatibility (PS) -12523 + (NN) -4547 + (LL) 212
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -89363.0 ( -128.03 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4R25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R25-query.scw
PDB file :
Tito_Scwrl_4R25.pdb
: