Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEFLKYYDIPVIVIATKADKIPRSKWQKNAKIVRETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME
1SUL Chain:A ((1-191))
MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLA---------QTLNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKK---
General information:
TITO was launched using:
RESULT:
Template:
1SUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117071 for 1399 contacts (-83.7/contact) +
2D Compatibility (PS) -19214 + (NN) -5932 + (LL) 404
1D Compatibility (HY) -22000 + (ID) 6600
Total energy: -170413.0 ( -121.81 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1SUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUL-query.scw
PDB file :
Tito_Scwrl_1SUL.pdb
: