Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYHSEPHERVLGLAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFAIEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGDLVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEIDLTARNIIREAGFGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPGVAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE |
| 1WY2 Chain:A ((4-351)) | MNEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLAG---GYILIT-GESATLYVPELEYEMAKEESNI-PVEKFKKM----DEFYKALE----GIKSLGIES-SLPYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEKPAFDTIIASGYRSALPHGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFNHSLGHGVGLEVHEWPRVSQYDETVLREGMVITIEPGIYIPKIGGVRIEDTILITKNGSKRLTKTERELI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153123 for 3013 contacts (-50.8/contact) +
2D Compatibility (PS) -38150 + (NN) -15368 + (LL) 1492
1D Compatibility (HY) -24000 + (ID) 6450
Total energy: -235599.0 ( -78.19 by residue)
QMean score : 0.585
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