Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSS-----VDIATLHSFSAQAETLATFYPHLKDLAVSPLEKINPTE--IIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEF---REK-KETTFIANPGCYATATLLGLAPLATNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNS-HQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2I3G Chain:B ((11-352)) | -KVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEAAVLGGHDAVFLALPHGHSAVLAQQLSPETL-IIDCGADFRLTDAAVWERFYGSS-----HAGSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIEP-AVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQ--LRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194929 for 2911 contacts (-67.0/contact) +
2D Compatibility (PS) -36046 + (NN) -13479 + (LL) 840
1D Compatibility (HY) -18400 + (ID) 6300
Total energy: -268314.0 ( -92.17 by residue)
QMean score : 0.494
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