Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIDVPVTVSAGGGELNLTKKEIKEELAYQKQLVEKLRNADDNEEKIVKEYLADNDNAIANKIGNSEDSTEFIDTYIINDE---------------------TQLIFTDTEVMLDTTEMSNENEATSEEEKLLREEDSNESIISSIKEFGETVLFGQK-------VYAAASKTVSARHTRTV----YAKVSGNKLFTAGIGAKFTYNGAKVTAQTTENYVKVNGISGVVWSVHNKKNGVQKPSIKKRVVYQQATAKSGLTYKGNGLVVEEKYIRVNLECNHLGKVSKSSVVR |
3RUV Chain:A ((167-328)) | ----------------------KEKLA--EIIVEAVSAVVDDEGKVDKDLIK-----IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKD------MVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAA---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8647 for 632 contacts (-13.7/contact) +
2D Compatibility (PS) -14408 + (NN) -8227 + (LL) 6968
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -33314.0 ( -52.71 by residue)
QMean score : 0.309
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