Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALEEKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSVIRYHKFLGQLIDGYTSIAITGSHGKTSTTGLLSHVVG--AIRPT----SYLIGDGTGSGTKDAEYFALEACEYQRHFLAYKPTYAIMTNIDWDHPDY----FKSVDDVFNAFETLGKQVKKAVFALGDDAELRKLTLDIP--IIYFGFGEENEFQAKNVIKETTGTKFDVYHREEFLSSFEIPAYGDHNVLNALSVIALCDYEGLPVEDVKNELKTFEGVKRRFSIT----------EKGNQVLVDDYAHHPSEIRATVNAARQKYPDKKVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKGNH------IIKEEHTEELLKY---PEAVILFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN |
| 4HV4 Chain:A ((26-474)) | ----HFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCI-DDPVVRELLPRVGRHITTYGFSDDADVQIASYRQEGPQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVAVATEEGIEDEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDDYGHHPTEVDATIKAARAGWPDKRIVMLFQPHRYTRTRDLYDDFANVLSQVDVLLMLDVYAAGEPPIPGADSRALCRTIRNRGKLDPILVPDSESAPEMLAQILNGEDLILVQGAGNIGKI------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212097 for 3566 contacts (-59.5/contact) +
2D Compatibility (PS) -44541 + (NN) -13507 + (LL) 2568
1D Compatibility (HY) -26800 + (ID) 6750
Total energy: -301127.0 ( -84.44 by residue)
QMean score : 0.451
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