Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFLHTADLHLGKIVSGV----SMLAEQEYILTQITQIAEEEQVDALILAGDLYDR-AVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQ-WYESSKLYMKGKCTSQFDGIPF---MDAEVWLVPYHEPAIIRQAFADNSIRSFEDAMQAVTKQIRSKWDTSKAQILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFD-GFTYTALGHLHHPHAIRH-PSIFYSGSPLKYSFSEANDHKSVRIVELEGK-ELISVTERFLTPKHDMRIISG------TLAELTENLVENPDDFFQVNLMDEGA-LIDPMGKLRQFYPNILHLERKKQTLK--E-TQ-D-SF-EEIMKKDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE |
| 3THO Chain:B ((1-377)) | MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR--TAPVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFE--PVDVEAKRGQKVRILPFPYPDES----KNEGDFRFFLESRLNKLYE---EALKKEDFAIFMGHFTVEGLAG----------REIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPP-RYERIDASPL-PLKTLYYKKIDTSALKSIRDSCRN-FPGYVRVVYEEDSGILPDLMGEI----DNLVKIERKSRREIEEVLRESPEEFKEELDKLDYFELFKEYLKKR--EENHEKLLKILDELLDEVKKS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146837 for 2523 contacts (-58.2/contact) +
2D Compatibility (PS) -36441 + (NN) -12833 + (LL) 2500
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -214061.0 ( -84.84 by residue)
QMean score : 0.480
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