Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLIPLSLIIFLGFLAVLCLFDFVFRLYWFKYFLATMGLIASGVVFFISFYGGGMSQTEIAIAIFIGSFGEYVVSLIISLVRFISRKSKKPKQKKKAKTA
2X1G Chain:F ((398-460))
----------------------------------------------------------------------EYIKPLYAHLTRILVRKSEQPDEKSLAK--
General information:
TITO was launched using:
RESULT:
Template:
2X1G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2663 for 101 contacts (-26.4/contact) +
2D Compatibility (PS) -2829 + (NN) -1603 + (LL) 6708
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -2587.0 ( -25.61 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_2X1G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X1G-query.scw
PDB file :
Tito_Scwrl_2X1G.pdb
: