Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNRANVHYIEW--LNEDKLPNLEDLPVDVCINLAGAGLMD--EKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENTYAD-NFLGKTVYEWEKTASAASDLGIRVVYARFGLVLGTNGGSFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQINGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILG-ERAMTILDSQRAYPEKLMSNHFEFRFETLQEALDDLLD |
| 4B4O Chain:A ((2-293)) | -RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR-----ITWDELAASGLPS-----CDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEY--DEDSPGGDFDFFSNLVTKWEAAARLPGD-STRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170604 for 2446 contacts (-69.7/contact) +
2D Compatibility (PS) -31076 + (NN) -17599 + (LL) 1084
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -239595.0 ( -97.95 by residue)
QMean score : 0.533
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