Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVMIVYASMTGNTQEIADILGEELEKYDIEVEIEECISVDPEDLLE-YDGALIG--GYTYDDGQLPDEFVDFYEDMADVDFSGKVCASFGSGDTFYDEYCLTVDLVETRLKEQGATVPVAGLKVDLDPDEEDVVRAESYAKTFVEALKG
3F6S Chain:I ((2-130))
-SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLADGYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKMEGDA---------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73613 for 1012 contacts (-72.7/contact) +
2D Compatibility (PS) -13439 + (NN) -6787 + (LL) 1960
1D Compatibility (HY) -7600 + (ID) 2250
Total energy: -101729.0 ( -100.52 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_3F6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6S-query.scw
PDB file :
Tito_Scwrl_3F6S.pdb
: