Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLGIMGTNWITDSFIEGAINSGEWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLNGEEPNIFSLKFSGGSIVDLGVYPLYSAITLFGEPVKATYFATKLPTGVDGLGPIILEYPTFNITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVANDMQFEAAEFARIIEQSDRDTYE-YLADLSLKVLRVSNELRHQNDIWFDAEK |
| 4NHE Chain:C ((5-328)) | LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKS-SFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIK-NFLADKQVLGADFNYAKYSSKMPDLLAGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFGKANDATYHAQQLDNSIDLNGDGILFYPDYQVHIKAGKNITSNLPCEIYTTDGTLTLNTIEHIRSAIFTDH-QGNQVQLPIQQAPHTMTEEVAAFAHMIQQPDLNLYQTWLYDAG-SVHELLYTMRQTAGIRFEAEK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -163693 for 2787 contacts (-58.7/contact) +
2D Compatibility (PS) -35028 + (NN) -15028 + (LL) 348
1D Compatibility (HY) -25200 + (ID) 6650
Total energy: -245251.0 ( -88.00 by residue)
QMean score : 0.525
|
|
|