Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDA-HTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASKLDGNFDRMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYHAAIQAGAKLVMTAFNVVDGVPATMNKWLNRDVLRGEMD-FDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKLSESLLDEAVLRMLHLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGVESAVLLENKNRLLPLAKETKIALVGPLAS-SPDILGGWNVYGEEKDGINVETGLREVF---ETVEVIST-EYTE--------------------FSD-EDKVAVKAAVQNMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLEKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGE---RYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELN-LGEPLHVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVTFELTSEAFSFYNHQLEKVQEPGLHRIFVGTSSEDVDAFELEVGGYV
3U48 Chain:A ((3-730))-MNQFINALMAKMTLDEKIGQLNLPGAGDITT-GQ--------ASSSGIAQKIKEGKVGGLFNIKSVTKIKEVQRIAVEESRLKIPLLFGMDVIHGYETAFPIPLGLSCTWDMELIEKSARIAAIEASADGICWTFSPMVDISRDPRWGRVSEGSGEDPYLGAQIAKAMVKGYQGKD--FS-DNTSIMACVKHFALYGAGEAGRDYNTVDMSRVRMYNEYFPPYKAAVDAGVGSVMTSFNEIDGIPATGNKWLMTDVLRKRIGAFKGFVVTDYTAINEMIDHGM-GDLQTVSALALRAGVDMDMVGEGFLTTLKKSLQEGKITQAQIDAACKRILEAKYKLGLFSDPYKYCNEERARTQIFTPEHRKIAREIAAQSFVLLKNDNNVLPLKKSGTIALVGPLADNRVNMPGTWSVAAKHAESVSLLEGLKKAAGNDARILYAHGSNLDEDKSLIERATMFGKTLKYDPRPKDVVIKEAVDI-ANQADVIVAALGESAEMSGEASSRSNIEIPALQRELLQALLKTGKPVVLVLFTGRPLALTWEHENVPAILNVWFAGTEAGDAISDALFGVVNPSGKLSATFPRNVGQVPIYYNHKNTGRP---LPEGQWFQKFRSNYLDVPNDPLYPFGYGLSFTKFTYGDLKLSSTNLKGNQTLTASIELTNSGDYDGAEVVQLYIRDLVGSTTRPVKELKGFQKVFLKKGETKTITFKITPEDLKFYNYDLKYDWEPGEFVIMVGGNSRDLKS---------


General information:
TITO was launched using:
RESULT:

Template: 3U48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -265444 for 6465 contacts (-41.1/contact) +
2D Compatibility (PS) -74432 + (NN) -20670 + (LL) 1352
1D Compatibility (HY) -52800 + (ID) 14750
Total energy: -426744.0 ( -66.01 by residue)
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_3U48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U48-query.scw
PDB file : Tito_Scwrl_3U48.pdb: