Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
3IP4 Chain:C ((3-94))
--KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI---
General information:
TITO was launched using:
RESULT:
Template:
3IP4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6325 for 386 contacts (-16.4/contact) +
2D Compatibility (PS) -9828 + (NN) -3230 + (LL) 580
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -26953.0 ( -69.83 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_3IP4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP4-query.scw
PDB file :
Tito_Scwrl_3IP4.pdb
: