Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHLFKLDPAKNLPTNDVTKLIHSGTDGFIIGGTDNVQIEAVQNLYELLVETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHKELIKEMGEFIPWKRVTSEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMYGDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMAKYADTIIVGNIIYEDLEKALETATIFRKKTV
3W01 Chain:B ((13-230))
-RHIFKLDPAKHISDDDLDAICMSQTDAIMIG----VTEDNVIHLMSKIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKI------
General information:
TITO was launched using:
RESULT:
Template:
3W01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149075 for 1726 contacts (-86.4/contact) +
2D Compatibility (PS) -23441 + (NN) -8956 + (LL) 536
1D Compatibility (HY) -23200 + (ID) 4850
Total energy: -208986.0 ( -121.08 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_3W01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W01-query.scw
PDB file :
Tito_Scwrl_3W01.pdb
: