Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKEDVAKIRANAKFDVDRIHEIELETRHDVVAFTRSVSES--LGAERKWVHYGLTSTDVVDTANSYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFNFAADGVEFGKISGAVGTYANIDPFVETYVCEKLGTTPAPISTQTLQRDRHAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSENVTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFRELVEQDATITENLSAEEIADCFDYNYHLKNVDLIFDRLGL |
| 2PFM Chain:A ((11-441)) | -ISRYTRPEMGAIWTEENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHASFDIDRIYEIEKETRHDVVAFTRAVSETPALGEERKWVHYGLTSTDVVDTALSYILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMKRNVERFKQAANTVRVGKLSGAVGTYANIDPFVEKYVCENLGLEAAPISTQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQKSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYENVPLWHERDISHSSAERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEADERITSKLTQEEINECFNYEHHMQHVDTIFERLGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170353 for 3446 contacts (-49.4/contact) +
2D Compatibility (PS) -45805 + (NN) -13788 + (LL) 208
1D Compatibility (HY) -53600 + (ID) 16950
Total energy: -300288.0 ( -87.14 by residue)
QMean score : 0.535
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