Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK
1TIG Chain:A ((83-170))
----------------------------------------------------------------------------------INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAPKMDGRNMFLVLAPKND-
General information:
TITO was launched using:
RESULT:
Template:
1TIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43569 for 605 contacts (-72.0/contact) +
2D Compatibility (PS) -9577 + (NN) -3821 + (LL) 6372
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -62745.0 ( -103.71 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_1TIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIG-query.scw
PDB file :
Tito_Scwrl_1TIG.pdb
: